GrippeBelgiqueV4, Main, Exploration, bibRecord, 000050

Comparison of the FilmArray RP, Verigene RV+, and Prodesse ProFLU+/FAST+ multiplex platforms for detection of influenza viruses in clinical samples from the 2011-2012 influenza season in Belgium.

Identifieur interne : 000050 ( Main/Exploration ); précédent : 000049; suivant : 000051

Comparison of the FilmArray RP, Verigene RV+, and Prodesse ProFLU+/FAST+ multiplex platforms for detection of influenza viruses in clinical samples from the 2011-2012 influenza season in Belgium.

Auteurs : Liesbeth Van Wesenbeeck [Belgique] ; Hanne Meeuws ; Andrea Van Immerseel ; Gabriela Ispas ; Kristiane Schmidt ; Lieselot Houspie ; Marc Van Ranst ; Lieven Stuyver

Source :

Journal of clinical microbiology [ 1098-660X ] ; 2013.

RBID : pubmed:23824777

Descripteurs français

KwdFr :
- Adolescent, Adulte, Adulte d'âge moyen, Belgique, Enfant, Enfant d'âge préscolaire, Femelle, Grippe humaine (diagnostic), Humains, Jeune adulte, Muqueuse nasale (virologie), Mâle, Nourrisson, Nouveau-né, Orthomyxoviridae (isolement et purification), Sensibilité et spécificité, Sujet âgé, Sujet âgé de 80 ans ou plus, Techniques de diagnostic moléculaire (), Virologie (), Études prospectives.
MESH :
- diagnostic : Grippe humaine.
- isolement et purification : Orthomyxoviridae.
- virologie : Muqueuse nasale.
- Adolescent, Adulte, Adulte d'âge moyen, Belgique, Enfant, Enfant d'âge préscolaire, Femelle, Humains, Jeune adulte, Mâle, Nourrisson, Nouveau-né, Sensibilité et spécificité, Sujet âgé, Sujet âgé de 80 ans ou plus, Techniques de diagnostic moléculaire, Virologie, Études prospectives.
Wicri :
- geographic : Belgique.

English descriptors

KwdEn :
- Adolescent, Adult, Aged, Aged, 80 and over, Belgium, Child, Child, Preschool, Female, Humans, Infant, Infant, Newborn, Influenza, Human (diagnosis), Male, Middle Aged, Molecular Diagnostic Techniques (methods), Nasal Mucosa (virology), Orthomyxoviridae (isolation & purification), Prospective Studies, Sensitivity and Specificity, Virology (methods), Young Adult.
MESH :
- geographic : Belgium.
- diagnosis : Influenza, Human.
- isolation & purification : Orthomyxoviridae.
- methods : Molecular Diagnostic Techniques, Virology.
- virology : Nasal Mucosa.
- Adolescent, Adult, Aged, Aged, 80 and over, Child, Child, Preschool, Female, Humans, Infant, Infant, Newborn, Male, Middle Aged, Prospective Studies, Sensitivity and Specificity, Young Adult.

Abstract

Respiratory tract infections (RTIs) are caused by a plethora of viral and bacterial pathogens. In particular, lower RTIs are a leading cause of hospitalization and mortality. Timely detection of the infecting respiratory pathogens is crucial to optimize treatment and care. In this study, three U.S. Food and Drug Administration-approved molecular multiplex platforms (Prodesse ProFLU+/FAST+, FilmArray RP, and Verigene RV+) were evaluated for influenza virus detection in 171 clinical samples collected during the Belgian 2011-2012 influenza season. Sampling was done using mid-turbinate flocked swabs, and the collected samples were stored in universal transport medium. The amount of viral RNA present in the swab samples ranged between 3.07 and 8.82 log10 copies/ml. Sixty samples were concordant influenza A virus positive, and 8 samples were found to be concordant influenza B virus positive. Other respiratory viruses that were detected included human rhinovirus/enterovirus, respiratory syncytial virus, parainfluenza virus type 1, human metapneumovirus, and coronavirus NL63. Twenty-five samples yielded discordant results across the various assays which required further characterization by sequencing. The FilmArray RP and Prodesse ProFLU+/FAST+ assays were convenient to perform with regard to sensitivity, ease of use, and low percentages of invalid results. Although the limit of sensitivity is of utmost importance, many other factors should be taken into account in selecting the most convenient molecular diagnostic assay for the detection of respiratory pathogens in clinical samples.

DOI: 10.1128/JCM.00911-13
PubMed: 23824777

Affiliations:

Belgique

Links toward previous steps (curation, corpus...)

to stream Main, to step Corpus: 000044
to stream Main, to step Curation: 000044

Le document en format XML

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<front><div type="abstract" xml:lang="en">Respiratory tract infections (RTIs) are caused by a plethora of viral and bacterial pathogens. In particular, lower RTIs are a leading cause of hospitalization and mortality. Timely detection of the infecting respiratory pathogens is crucial to optimize treatment and care. In this study, three U.S. Food and Drug Administration-approved molecular multiplex platforms (Prodesse ProFLU+/FAST+, FilmArray RP, and Verigene RV+) were evaluated for influenza virus detection in 171 clinical samples collected during the Belgian 2011-2012 influenza season. Sampling was done using mid-turbinate flocked swabs, and the collected samples were stored in universal transport medium. The amount of viral RNA present in the swab samples ranged between 3.07 and 8.82 log10 copies/ml. Sixty samples were concordant influenza A virus positive, and 8 samples were found to be concordant influenza B virus positive. Other respiratory viruses that were detected included human rhinovirus/enterovirus, respiratory syncytial virus, parainfluenza virus type 1, human metapneumovirus, and coronavirus NL63. Twenty-five samples yielded discordant results across the various assays which required further characterization by sequencing. The FilmArray RP and Prodesse ProFLU+/FAST+ assays were convenient to perform with regard to sensitivity, ease of use, and low percentages of invalid results. Although the limit of sensitivity is of utmost importance, many other factors should be taken into account in selecting the most convenient molecular diagnostic assay for the detection of respiratory pathogens in clinical samples. </div>
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<ForeName>Liesbeth</ForeName>
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Comparison of the FilmArray RP, Verigene RV+, and Prodesse ProFLU+/FAST+ multiplex platforms for detection of influenza viruses in clinical samples from the 2011-2012 influenza season in Belgium.

Comparison of the FilmArray RP, Verigene RV+, and Prodesse ProFLU+/FAST+ multiplex platforms for detection of influenza viruses in clinical samples from the 2011-2012 influenza season in Belgium.

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